I know I'm replying to a post that is a month old, but since steve did...
EGR is a double edged sword. It controls emessions (eh), and it is an important system to control pre-ignition; arguably the most important. (Including knock sensors. For the record I said arguably, not is more important!)
The problems are that it takes power at part throttle (not a problem - just use more throttle), takes power at full throttle (Carbon build-up lowers intake velocity), and the carbon itself is a sorce of pre-ignition. You also get into many engines where the EGR valve is located directly pointing to, or near the IAC/ISC idle control, and the throttlebody. The IAC/ISC, throttlebody, AND EGR valves are all bad to clog with carbon & stop functioning because of it.
Like I said. EGR is a double edged sword. Good for the masses (Plus it gives mechanics something to charge $100 for 10 min worth of diagnostics & work), but it is not good for performance applications. It's simply one more thing to deal with.
(You *could* concieveably use it in a performance application to gain those extra few points of octane needed, but there are many problems with this, no solutions, noone with experiance doing so, and lastly you will have to tear the engine down to clean it.)
This is a 1999 1mz-fe v6, picture taking in 2003 of the upper intake air chamber (AKA the upper most intake manifold).

That is only 4 years worth of normal driving.
My '93 3vz-fe v6, pictures taken in 2004.
Intake manifold

Intake port
